MolecularWorkbench Examples

Examples Index ...
Confluence Notes

Run Examples

example jnlp jnlp Date of last change otml file most recent revision
channelgraph learner author Tue, 26 Feb 2008 20:51:32 GMT channelgraph.otml 12632
channelgraphauthoring learner author Thu, 07 Aug 2008 20:43:38 GMT channelgraphauthoring.otml 14771
document-chemical-reactions-ethane learner author Tue, 26 Jun 2007 17:11:17 GMT document-chemical-reactions-ethane.otml 127
document-chemical-reactions-methane learner author Tue, 26 Jun 2007 17:11:17 GMT document-chemical-reactions-methane.otml 127
document-heat-and-temp-thermal-conduction-b learner author Wed, 26 Mar 2008 16:26:53 GMT document-heat-and-temp-thermal-conduction-b.otml 13036
document-heat-and-temp-thermal-conduction-mary learner author Mon, 07 Jan 2008 14:27:39 GMT document-heat-and-temp-thermal-conduction-mary.otml 9189
document-heat-and-temp-thermal-conduction learner author Thu, 03 Jan 2008 22:04:31 GMT document-heat-and-temp-thermal-conduction.otml 9179
document-heat-and-temp-v2 learner author Thu, 29 Nov 2007 17:00:27 GMT document-heat-and-temp-v2.otml 8896
document-heat-and-temp learner author Tue, 27 Nov 2007 15:11:01 GMT document-heat-and-temp.otml 8880
document-mw-drop learner author Fri, 11 May 2007 17:37:11 GMT document-mw-drop.otml 40
document-mw-heatflow-step1-cml learner author Fri, 11 May 2007 17:37:11 GMT document-mw-heatflow-step1-cml.otml 40
document-mw-heatflow-step1-toolbar learner author Fri, 11 May 2007 17:37:11 GMT document-mw-heatflow-step1-toolbar.otml 40
document-mw-heatflow-step1 learner author Fri, 11 May 2007 17:37:11 GMT document-mw-heatflow-step1.otml 40
document-mw-model learner author Fri, 11 May 2007 17:37:11 GMT document-mw-model.otml 40
document-mw-simple learner author Fri, 11 May 2007 17:37:11 GMT document-mw-simple.otml 40
forcesensormodel learner author Thu, 10 Apr 2008 19:19:56 GMT forcesensormodel.otml 13221
forcesensormodelgraph learner author Thu, 10 Apr 2008 19:41:06 GMT forcesensormodelgraph.otml 13223
liquidgasgraph learner author Thu, 24 Jul 2008 13:23:52 GMT liquidgasgraph.otml 14388
modelpropertygraph learner author Wed, 20 Feb 2008 20:48:47 GMT modelpropertygraph.otml 12510
mwquestions learner author Mon, 27 Oct 2008 20:12:35 GMT mwquestions.otml 16072
objectpropertygraph learner author Wed, 20 Feb 2008 20:48:47 GMT objectpropertygraph.otml 12510
sensormodel learner author Wed, 09 Apr 2008 20:02:22 GMT sensormodel.otml 13197
sensormodelauthoring learner author Wed, 09 Apr 2008 20:02:22 GMT sensormodelauthoring.otml 13197
temperaturesensormodelgraph learner author Mon, 27 Oct 2008 20:12:35 GMT temperaturesensormodelgraph.otml 16072

MacOS X Java Web Start Problem

If you are using Java 1.5 on MacOS 10.4 or 10.5 you will almost certainly need to run some version of the fixes described on our How to fix Mac OS X WebStart bugs, once on each computer you run the Concord SAIL-OTrunk activities on. If you update Java on your Macintosh you will need to fix this problem again. The problem appears on Mac OS X computers when starting a Java Web Start program you have run before -- if a jar file needs to be updated the download process will freeze without completing.


Description of the difference between running an activity in learner mode and author mode

Running an OTrunk example in learner mode uses the default view mode which assumes a learner. In addition if you use the File menu to save the otml only the differences between the activity otml and the changes will be saved. The otml saved is the learner difference otml and is often much smaller than activty otml.

Running an OTrunk example in author mode sets the following jnlp properties:

Setting otrunk.view.author to true causes the entire OTrunk state to be saved as otml when a File save is performed. Setting otrunk.view.mode to authoring is used in the view system to enable authoring affordances in the views. Many examples do not have special authoring views. The Basic Example: document-edit.otml does have both authoring and student view modes.


All Files

OTViewer_MW_channelgraph.launch
OTViewer_MW_channelgraphauthoring.launch
OTViewer_MW_forcesensormodel.launch
OTViewer_MW_forcesensormodelgraph.launch
OTViewer_MW_liquidgassmartmodel.launch
OTViewer_MW_model.launch
OTViewer_MW_modelpropertygraph.launch
OTViewer_MW_mwquestions.launch
OTViewer_MW_objectpropertygraph.launch
OTViewer_MW_scripting_chem_reactions_1.launch
OTViewer_MW_scripting_heat_temp.launch
OTViewer_MW_scripting_heat_temp_thermal_conduction.launch
OTViewer_MW_sensormodel.launch
OTViewer_MW_sensormodelauthoring.launch
OTViewer_MW_temperaturesensormodelgraph.launch
OTViewer_RI-ITEST_authoring.launch
channelgraph.otml
channelgraphauthoring.otml
document-chemical-reactions-ethane.otml
document-chemical-reactions-methane.otml
document-heat-and-temp-thermal-conduction-b.js
document-heat-and-temp-thermal-conduction-b.otml
document-heat-and-temp-thermal-conduction-mary.js
document-heat-and-temp-thermal-conduction-mary.otml
document-heat-and-temp-thermal-conduction-mw-graph.js
document-heat-and-temp-thermal-conduction.js
document-heat-and-temp-thermal-conduction.otml
document-heat-and-temp-v2.otml
document-heat-and-temp.js
document-heat-and-temp.otml
document-mw-drop.otml
document-mw-heatflow-step1-cml.otml
document-mw-heatflow-step1-toolbar.otml
document-mw-heatflow-step1.otml
document-mw-model.otml
document-mw-simple.otml
forcesensormodel.otml
forcesensormodelgraph.otml
heatflow-cml-just-models
index.html
liquidgasgraph.otml
modelpropertygraph.otml
mwquestions.otml
objectpropertygraph.otml
ot-index.html
resources
sensormodel.otml
sensormodelauthoring.otml
temperaturesensormodelgraph.otml
thermal-conduction-models

The jnlp urls were constructed using the following template:
http://saildataservice.concord.org/2/offering/144/jnlp/540/view/nobundles?sailotrunk.otmlurl=%otml_url%&sailotrunk.hidetree=false
You can change this string by putting it in a file named: jnlp_url.tmpl in this directory