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                  <br />
                  <div class="activity-title">Intro</div>
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                                  Today is a very exciting day on the island of Gandwar. Two dragons 
          there are about to have a baby. Because it happens only about every 
          500 years, the birth of a dragon is met with great anticipation. The 
          lucky parents are Molthwan and Lucenne, two of the island’s most 
          admired inhabitants.
                                  <br />
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                                      <td>
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                                      </td>
                                    </tr>
                                  </table>
                                  Like all eager parents, Molthwan and Lucenne are anxious to know 
          what their  baby will be like. Molthwan is especially interested in 
          knowing whether the baby will be born with horns, a much-admired 
          trait. Lucenne is hoping that the baby will have wings and be able 
          to fly, something not many dragons on Gandwar are able to do.
                                  <br />
                                </div>
                              </div>
                            </div>
                          </bodyText>
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                          <bodyText>
                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  <table>
                                    <tr>
                                      <td>Try breeding some dragons to see if you can figure out any 
                rules that govern which dragons have horns.</td>
                                    </tr>
                                    <tr>
                                      <td>
                                        <object refid="${breedOffspringView}" editable="true" />
                                      </td>
                                    </tr>
                                    <tr>
                                      <td>
                                        <object refid="${breedOffspringView2}" editable="true" />
                                        <br />
                                        <object refid="3262387d-6511-11dd-ac85-bb6ebc537d22" />
                                      </td>
                                    </tr>
                                    <tr>
                                      <td>
                                        <br />
                                      </td>
                                    </tr>
                                  </table>
                                </div>
                              </div>
                            </div>
                          </bodyText>
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                                <OTCompoundDoc>
                                  <bodyText>Based on these examples, what kind of a trait do you think horns are?</bodyText>
                                </OTCompoundDoc>
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                              <input>
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                                  <choices>
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                          <bodyText>
                            <table width="100%">
                              <tr>
                                <td>Now try breeding some dragons to see if you can figure out any rules 
          that govern which dragons have wings. Click the button to breed 
          possible children from these pairs.</td>
                              </tr>
                              <tr>
                                <td>
                                  <object refid="${breedOffspringView}" editable="false" />
                                  <br />
                                  <object refid="1615797e-6509-11dd-ac85-bb6ebc537d22" />
                                  <br />
                                </td>
                              </tr>
                              <tr>
                                <td>
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                                  <br />
                                  <object refid="4cdb3c0b-6509-11dd-ac85-bb6ebc537d22" />
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                              </tr>
                            </table>
                          </bodyText>
                          <documentRefs>
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                                  <bodyText>What can you say about the offspring of two dragons that have wings?</bodyText>
                                </OTCompoundDoc>
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                                <OTText name="Open response" />
                              </input>
                            </OTUDLQuestion>
                            <OTUDLQuestion id="4cdb3c0b-6509-11dd-ac85-bb6ebc537d22" name="Question" showConvertButton="true">
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                                  <bodyText>If one parent has wings, does that guarantee that the child will have wings?</bodyText>
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                                  <bodyText>What do these two scenarios tell you about how wings are inherited?</bodyText>
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                                  <alleles>b:h,a:h,b:S,a:S,b:W,a:W,b:l,a:L,b:t,a:t,b:p,a:p,b:F,a:F,b:A,a:a,b:B,a:B</alleles>
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                          <bodyText>
                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  <table>
                                    <tr>
                                      <td>Do you have an idea about how wings are inherited? Try the two 
                scenarios below to see if they confirm your suspicions.</td>
                                    </tr>
                                    <tr>
                                      <td>
                                        <object refid="${breedOffspringView3}" editable="false" />
                                      </td>
                                    </tr>
                                    <tr>
                                      <td>
                                        <object refid="${breedOffspringView4}" editable="false" />
                                      </td>
                                    </tr>
                                    <tr>
                                      <td>
                                        <object refid="7008f8e9-6509-11dd-ac85-bb6ebc537d22" />
                                        <br />
                                        <object refid="b611d402-650b-11dd-ac85-bb6ebc537d22" />
                                        <br />
                                      </td>
                                    </tr>
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                                </div>
                              </div>
                            </div>
                          </bodyText>
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                                  <bodyText>What kind of trait do you think wings are?</bodyText>
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                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  <div class="subtitle">Looking Deeper</div>
                                  You have an idea about how horns and wings are inherited. In the 
          next section, you will look deeper into the genetics of dragons to 
          determine whether you were correct. Use the menu at left to move to the next section.
                                </div>
                              </div>
                            </div>
                          </bodyText>
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                        <OTUDLCompoundDoc local_id="section-1-page-7" showDefinitions="false">
                          <bodyText>
                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  Below is a dragon and its chromosomes. You can control and change the dragon's genes. 
Try changing some of the genes and see what happens. Experiment with the genes for horns and wings to see if you were correct.
                                  <br />
                                  <table>
                                    <td>
                                      <object refid="${Zandar_static}" />
                                    </td>
                                    <td>
                                      <object refid="94904970-6517-11dd-bd45-d9d11cbf97e7" />
                                    </td>
                                    <td>
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                                    </td>
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                                  <table>
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                                      <object refid="ec63a7db-6517-11dd-bd45-d9d11cbf97e7" />
                                      <br />
                                      <object refid="${snapshot3}" />
                                      <br />
                                      What other traits can you change on this dragon? Find one trait you think is particularly interesting, and use the button above to take a snapshot for your lab notebook. Use the toolbar to point to or circle the trait, and write a note in your notebook describing how you caused that trait to be expressed. (Note: You can view your notebook at any time by clicking the notebook icon at the lower right.)
                                    </tr>
                                  </table>
                                </div>
                              </div>
                            </div>
                          </bodyText>
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                                  <bodyText>Which gene combinations yield horns?</bodyText>
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                                  <bodyText>Which gene combinations yield wings?</bodyText>
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                                <OTChoiceMultiple name="Multiple choice (check boxes)" alignContent="0">
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                <OTUDLSection local_id="section-2" name="Meiosis">
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                          <bodyText>
                            Below you can see this couple's germ cells. By pressing the 
    triangular play button, you can cause the cells to undergo meiosis. Click 
    on the magnifying glass to zoom the views in for a closer look.
                            <br />
                            <object refid="f87576ab-651c-11dd-bd45-d9d11cbf97e7" />
                            <br />
                            <p>
                              When both dragons have undergone meiosis, you can combine two gametes 
      and fertilize them to create a child. Click one of the four gametes 
      under each dragon and use the arrow buttons to move them into the 
      middle. Before you click play to run fertilization, zoom in with the 
      magnifying glass. Can you predict how the child will look just by 
      examining the genes?
                              <em>(Note: You can click and drag the chromosomes 
      to separate them for a better look.)</em>
                            </p>
                          </bodyText>
                        </OTUDLCompoundDoc>
                        <OTUDLCompoundDoc local_id="section-2-page-4" name="2-4" showEditBar="true" showDefinitions="true">
                          <bodyText>
                            <p>
                              Now zoom in on our Daddy dragon. Your goal will be to create a 
      child dragon with wings, but no legs. To inherit these traits, the child 
      will need to have the gene combinations
                              <em>ww</em>
                              and
                              <em>ll</em>
                              .
                            </p>
                            <p>
                              Can the father provide his half of these combinations?
                              <br />
                              <br />
                              <object refid="edd7e556-6524-11dd-bd45-d9d11cbf97e7" />
                            </p>
                            <p />
                            <object refid="${meiosis-challenge-view}" />
                            <br />
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                          <bodyText>
                            <p>Now reset the meiosis and zoom in on our expectant mother 
      dragon. Run meiosis a few times. (Note that you will have to return to 
      the un-zoomed view and hit "reset" to get a fresh run).</p>
                            <p>
                              If we want to "design" a child dragon with the gene combinations
                              <em>ww</em>
                              and
                              <em>ll</em>
                              , can the mother carry through on her part of the bargain?
                              <br />
                              <br />
                              <object refid="8e4450fa-6525-11dd-bd45-d9d11cbf97e7" />
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                            <p />
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                            <br />
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                          <bodyText>
                            <p>
                              If you looked closely, you noticed that we have a problem. The mother can only give chromosomes with 
      the genes
                              <em>Wl</em>
                              or wL. And neither of these will help us in our 
      quest. Fortunately, there's a catch… Zoom in on the mother and press 
      the triangular "play" button again. The process will stop halfway 
      through and wait for you. When it does, click on one chromosome with the 
      tip of your mouse. See the flashing arrows? The arrows show places on 
      other organisms you can click. Try it.
                            </p>
                            <object refid="${meiosis-challenge-view-crossover}" />
                            <br />
                            <object refid="${snapshot2}" />
                            <p>
                              Congratulations, you just created a child by crossing genes over! (This 
      is also called genetic recombination, by the way.) Zoom out to reset 
      things, and try a few more times. Can you create our desired
                              <em>ww</em>
                              and
                              <em>ll</em>
                              dragon now? Give it a shot.
                            </p>
                            <p>
                              When you think you've succeeded (and
                              <strong>before</strong>
                              you proceed to breed the child!), zoom in on the chromosomes you crossed over and take a snapshot for your lab notebook. Write a note to go along with the snapshot describing what you did and why you think it will make the correct child dragon.
                            </p>
                          </bodyText>
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                <OTUDLSection local_id="section-3" name="Pedigree and Genes">
                  <content>
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                          <bodyText>
                            Now that you know how to breed dragons, let's try some selective breeding. 
    This is the pedigree view.
                            <br />
                            <p>Use the cross tool to breed a new generation of dragons. Then breed two of the 
      dragons from this new (F2) generation together. 
      Repeat this as far as you wish. What do you notice about the dragons as you continue to breed more generations this way?</p>
                            <p>Use the chromosome tool to examine the genes of the dragons more closely. Can you find any genes that are different among 
      the members of your F8 generation? How many generations do you have to breed until all the dragons are exactly the same?</p>
                            <br />
                            <!--                            <a href="${pedigreeErbScript}" target="2767fe20-6c7d-11dc-8314-0800200c9a66!/popup_frame">Click Me.</a>
                            <object refid="${pedigreeTextObject}" />-->
                            <br />
                            <object refid="${firstPedigreeView}" />
                            <!--                              <object refid="3ff1c0b5-652b-11dd-bd45-d9d11cbf97e7" /> -->
                            <object refid="${pedigreeInitialInvestigation}" />
                            <br />
                            <!--><object refid="${multipleOrganismView}" />
                            <br />
                            <object refid="${savePedigreeOrganismsButton}" />
                            <object refid="${clearPedigreeOrganismsButton}" />-->
                            <object refid="${resetPedigreeOrganismsButton}" />
                            <object refid="${snapshot1}" />
                            <p>
                              You are creating an
                              <em>inbred strain</em>
                              of dragons in the last generations of this process. When you think you have succeeded in creating a strain, use the button above to take a snapshot of your strain for your lab notebook. Along with the snapshot, write a note describing your strain, and explain what is special about all individuals in an inbred strain of organisms.
                            </p>
                          </bodyText>
                          <documentRefs>
                            <OTSnapshotButton local_id="snapshot1">
                              <snapshotAlbum>
                                <object refid="${album}" />
                              </snapshotAlbum>
                              <target>
                                <object refid="${firstPedigreeView}" />
                              </target>
                            </OTSnapshotButton>
                            <OTText local_id="pedigreeTextObject" text="This is a text placeholder!" />
                            <OTOrganism local_id="samplefemale" name="female" sex="1" alleles="b:h,a:H,b:S,a:S,b:W,a:w,b:l,a:L,b:t,a:t,b:p,a:p,b:f,a:f,b:A,a:a,b:B,a:B">
                              <world>
                                <OTWorld id="8a4637f5-651c-11dd-bd45-d9d11cbf97e7" speciesPath="org/concord/biologica/worlds/dragonmarkers-plates.xml" />
                              </world>
                            </OTOrganism>
                            <OTOrganism local_id="samplemale" name="male" sex="0" alleles="b:h,a:h,b:S,a:S,b:w,a:w,b:l,a:l,b:t,a:t,a:p,a:f,a:a,a:B">
                              <world>
                                <object refid="8a4637f5-651c-11dd-bd45-d9d11cbf97e7" />
                              </world>
                            </OTOrganism>
                            <OTPedigree local_id="firstPedigreeView" height="400" width="400" organismImagesVisible="true" organismImageSize="2" sexTextVisible="true">
                              <organisms>
                                <object refid="${samplemale}" />
                                <object refid="${samplefemale}" />
                              </organisms>
                            </OTPedigree>
                            <OTMultipleOrganism local_id="multipleOrganismView" width="300" height="100">
                              <organisms>
                                <object refid="${samplemale}" />
                                <object refid="${samplefemale}" />
                              </organisms>
                            </OTMultipleOrganism>
                            <OTScriptObject local_id="pedigreeInitialInvestigation">
                              <script>
                                <OTJRuby src="http://continuum.concord.org/otrunk/examples/Geniquest/scripts/pedigree_initial_investigation.rb" />
                              </script>
                              <variables>
                                <OTScriptVariableComponent name="pedigreeView">
                                  <reference>
                                    <object refid="${firstPedigreeView}" />
                                  </reference>
                                </OTScriptVariableComponent>
                                <OTScriptVariable name="textField">
                                  <reference>
                                    <object refid="${pedigreeTextObject}" />
                                  </reference>
                                </OTScriptVariable>
                              </variables>
                              <scriptState />
                            </OTScriptObject>
                            <OTScriptButton local_id="resetPedigreeOrganismsButton" text="Reset pedigree view" alwaysReload="true">
                              <script>
                                <OTJRuby src="http://continuum.concord.org/otrunk/examples/Geniquest/scripts/pedigree_reset_organisms.rb" />
                              </script>
                              <scriptVariables>
                                <OTScriptVariableComponent name="pedigreeView">
                                  <reference>
                                    <object refid="${firstPedigreeView}" />
                                  </reference>
                                </OTScriptVariableComponent>
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                                  <reference>
                                    <object refid="${multipleOrganismView}" />
                                  </reference>
                                </OTScriptVariableComponent>
                                <OTScriptVariableRealObject name="startingMale">
                                  <reference>
                                    <object refid="${samplemale}" />
                                  </reference>
                                </OTScriptVariableRealObject>
                                <OTScriptVariableRealObject name="startingFemale">
                                  <reference>
                                    <object refid="${samplefemale}" />
                                  </reference>
                                </OTScriptVariableRealObject>
                              </scriptVariables>
                            </OTScriptButton>
                            <OTScriptButton local_id="savePedigreeOrganismsButton" text="Save selected" alwaysReload="true">
                              <script>
                                <OTJRuby src="http://continuum.concord.org/otrunk/examples/Geniquest/scripts/multi_org_save_pedigree_organisms.rb" />
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                              <scriptVariables>
                                <OTScriptVariableComponent name="pedigreeView">
                                  <reference>
                                    <object refid="${firstPedigreeView}" />
                                  </reference>
                                </OTScriptVariableComponent>
                                <OTScriptVariableComponent name="multiOrgView">
                                  <reference>
                                    <object refid="${multipleOrganismView}" />
                                  </reference>
                                </OTScriptVariableComponent>
                              </scriptVariables>
                            </OTScriptButton>
                            <OTScriptButton local_id="clearPedigreeOrganismsButton" text="Clear all" alwaysReload="false">
                              <script>
                                <OTJRuby src="http://continuum.concord.org/otrunk/examples/Geniquest/scripts/multi_org_clear_button.rb" />
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                              <scriptVariables>
                                <OTScriptVariableComponent name="multiOrgView">
                                  <reference>
                                    <object refid="${multipleOrganismView}" />
                                  </reference>
                                </OTScriptVariableComponent>
                              </scriptVariables>
                            </OTScriptButton>
                            <OTButton local_id="pedigreeButton" text="Show Pedigree View">
                              <action>
                                <object refid="${show_pedigree_frame}" />
                              </action>
                            </OTButton>
                            <OTFrameDisplayAction local_id="show_pedigree_frame">
                              <frame>
                                <OTFrame local_id="popup_frame" width="500" height="500" />
                              </frame>
                              <objectToDisplay>
                                <object refid="${multipleOrganismView}" />
                              </objectToDisplay>
                            </OTFrameDisplayAction>
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                                  <bodyText>Describe what a dragon from your F8 generation would look like.</bodyText>
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                              <input>
                                <OTText name="Open response" rows="3" />
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                <OTUDLSection local_id="section-4" name="The Plates Problem">
                  <content>
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                          <bodyText>
                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  Some traits are less obvious than others. Here are two dragons and their chromosomes. Try changing the chromosomes and see what happens. Is it possible to tell what controls the plates on the lower dragon's back just by changing these genes?
                                  <table>
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                                      <td>
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                            </div>
                          </bodyText>
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                              <organism>
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                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  <div class="subtitle">Breeding Test Area</div>
                                  Try breeding some offspring to see what crosses between these strains produce. Does the inheritance of the plates tell you anything useful?
                                  <br />
                                  <table>
                                    <tr>
                                      <td>
                                        <table>
                                          <tr>
                                            <td align="left">
                                              <object refid="${breedOffspringViewForStrains}" editable="true" />
                                            </td>
                                          </tr>
                                          <tr>
                                            <td>
                                              <object refid="${multipleOrganismViewForStrains}" />
                                              <br />
                                              <object refid="${strainMultipleOrganismScript}" />
                                              <object refid="${multiOrgClearButton}" />
                                              <br />
                                            </td>
                                          </tr>
                                        </table>
                                      </td>
                                      <td>
                                        <table>
                                          <tr>
                                            <td>
                                              <object refid="${multipleOrganismViewTransfer}" />
                                              <br />
                                              <object refid="${multiOrgSaveFamilyButton}" />
                                            </td>
                                          </tr>
                                        </table>
                                      </td>
                                    </tr>
                                  </table>
                                </div>
                              </div>
                            </div>
                          </bodyText>
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                              <organisms>
                                <OTOrganism />
                                <OTOrganism />
                              </organisms>
                            </OTMultipleOrganism>
                            <OTBreedOffspring local_id="breedOffspringViewForStrains">
                              <fatherOrganism>
                                <OTOrganism local_id="maleStrainOrganism" chromosomesColor="-10066177" name="malePedigreeTest">
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                                  <sex>0</sex>
                                  <world>
                                    <OTWorld local_id="dragon_world_strains" speciesPath="org/concord/biologica/worlds/dragonmarkers-plates.xml" />
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                              </fatherOrganism>
                              <motherOrganism>
                                <OTOrganism local_id="femaleStrainOrganism" chromosomesColor="-39322" name="femalePedigreeTest">
                                  <name>female</name>
                                  <sex>1</sex>
                                  <world>
                                    <object refid="${dragon_world_strains}" />
                                  </world>
                                  <alleles>b:h,a:H,b:S,a:S,b:w,a:w,b:L,a:L,b:T,a:T,a:P,b:p,b:f,a:f,b:a,a:a,b:B,a:B</alleles>
                                </OTOrganism>
                              </motherOrganism>
                            </OTBreedOffspring>
                            <OTBreedOffspring local_id="strain_breedoffspring">
                              <motherOrganism>
                                <OTOrganism local_id="strain_1_female_breedoffspring" name="Strain 1 Female" sex="1" allowFatalCharacteristic="false" alleles="b:h,a:H,b:S,a:S,b:W,a:w,b:L,a:l,b:t,a:t,a:P,b:F,a:f,b:a,a:a,b:B,a:B">
                                  <world>
                                    <OTWorld speciesPath="org/concord/biologica/worlds/dragonmarkers-plates.xml" />
                                  </world>
                                </OTOrganism>
                              </motherOrganism>
                              <fatherOrganism>
                                <OTOrganism local_id="strain_2_male_breedoffspring" name="Strain 2 Male" sex="0" allowFatalCharacteristic="false" alleles="b:h,a:h,b:S,a:S,b:W,a:w,b:L,a:l,b:t,a:t,a:p,a:f,a:a,a:B">
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                                  </world>
                                </OTOrganism>
                              </fatherOrganism>
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                            <OTFamily local_id="strainFamily">
                              <father>
                                <object refid="${maleStrainOrganism}" />
                              </father>
                              <mother>
                                <object refid="${femaleStrainOrganism}" />
                              </mother>
                            </OTFamily>
                            <OTScriptButton local_id="multiOrgSaveFamilyButton" text="Save" alwaysReload="false">
                              <script>
                                <OTJRuby src="http://continuum.concord.org/otrunk/examples/Geniquest/scripts/multi_org_save_family_button.rb" />
                              </script>
                              <scriptVariables>
                                <OTScriptVariableComponent name="strainFamily">
                                  <reference>
                                    <object refid="${strainFamily}" />
                                  </reference>
                                </OTScriptVariableComponent>
                                <OTScriptVariableComponent name="breedOffspringView">
                                  <reference>
                                    <object refid="${breedOffspringViewForStrains}" />
                                  </reference>
                                </OTScriptVariableComponent>
                                <OTScriptVariableComponent name="multiOrgView">
                                  <reference>
                                    <object refid="${multipleOrganismViewForStrains}" />
                                  </reference>
                                </OTScriptVariableComponent>
                                <OTScriptVariableComponent name="multiOrgView2">
                                  <reference>
                                    <object refid="${multipleOrganismViewTransfer}" />
                                  </reference>
                                </OTScriptVariableComponent>
                              </scriptVariables>
                            </OTScriptButton>
                            <OTScriptButton local_id="moveUp" text="/\" alwaysReload="false">
                              <script>
                                <OTJRuby src="http://continuum.concord.org/otrunk/examples/Geniquest/scripts/multi_org_move_up_button.rb" />
                              </script>
                              <scriptVariables>
                                <OTScriptVariableComponent name="multiOrgView">
                                  <reference>
                                    <object refid="${multipleOrganismViewTransfer}" />
                                  </reference>
                                </OTScriptVariableComponent>
                              </scriptVariables>
                            </OTScriptButton>
                            <OTScriptButton local_id="moveDown" text="\/" alwaysReload="false">
                              <script>
                                <OTJRuby src="http://continuum.concord.org/otrunk/examples/Geniquest/scripts/multi_org_move_down_button.rb" />
                              </script>
                              <scriptVariables>
                                <OTScriptVariableComponent name="multiOrgView">
                                  <reference>
                                    <object refid="${multipleOrganismViewTransfer}" />
                                  </reference>
                                </OTScriptVariableComponent>
                              </scriptVariables>
                            </OTScriptButton>
                          </documentRefs>
                        </OTUDLCompoundDoc>
                        <OTUDLCompoundDoc local_id="section-4-page-3" name="4-3" showEditBar="true" showDefinitions="false">
                          <bodyText>
                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  <table>
                                    <tr>
                                      <td width="150">
                                        <object refid="${multipleOrganismViewTransferPlaceholder}" />
                                      </td>
                                      <td>
                                        Here are some of the chromosomes for these dragons in a different view. What do you think the colored bars represent? Take a snapshot and type your thoughts into a note.
                                        <table>
                                          <tr>
                                            <td>
                                              <object refid="${snapshot7}" />
                                              <object refid="${samplemale_strain_static}" />
                                              <object refid="${samplemale_strain_chromzoom}" />
                                            </td>
                                          </tr>
                                          <tr>
                                            <td>
                                              <object refid="${samplemale_strain_plates_static}" />
                                              <object refid="${samplemale_strain_plates_chromzoom}" />
                                            </td>
                                          </tr>
                                          <tr>
                                            <td>
                                              <object refid="${samplefemale_strain_plates_static}" />
                                              <object refid="${samplefemale_strain_plates_chromzoom}" />
                                            </td>
                                          </tr>
                                          <tr>
                                            <td>
                                              <object refid="${samplefemale_strain_static}" />
                                              <object refid="${samplefemale_strain_chromzoom}" />
                                            </td>
                                          </tr>
                                        </table>
                                      </td>
                                    </tr>
                                  </table>
                                </div>
                              </div>
                            </div>
                          </bodyText>
                          <documentRefs>
                            <OTSnapshotButton local_id="snapshot7">
                              <snapshotAlbum>
                                <object refid="${album}" />
                              </snapshotAlbum>
                              <target>
                                <object refid="${samplemale_strain_chromzoom}" />
                              </target>
                            </OTSnapshotButton>
                            <OTMultipleOrganism local_id="multipleOrganismViewTransferPlaceholder" width="150" height="400" organismImageSize="2">
                              <organisms>
                                <object refid="${samplemale_strain}" />
                                <object refid="${samplemale_strain_plates}" />
                                <object refid="${samplefemale_strain_plates}" />
                                <object refid="${samplefemale_strain}" />
                              </organisms>
                            </OTMultipleOrganism>
                            <OTStaticOrganism local_id="samplemale_strain_static">
                              <organism>
                                <object refid="${samplemale_strain}" />
                              </organism>
                            </OTStaticOrganism>
                            <OTStaticOrganism local_id="samplemale_strain_plates_static">
                              <organism>
                                <object refid="${samplemale_strain_plates}" />
                              </organism>
                            </OTStaticOrganism>
                            <OTStaticOrganism local_id="samplefemale_strain_plates_static">
                              <organism>
                                <object refid="${samplefemale_strain_plates}" />
                              </organism>
                            </OTStaticOrganism>
                            <OTStaticOrganism local_id="samplefemale_strain_static">
                              <organism>
                                <object refid="${samplefemale_strain}" />
                              </organism>
                            </OTStaticOrganism>
                            <OTChromosomeZoom local_id="samplemale_strain_chromzoom">
                              <organisms>
                                <object refid="${samplemale_strain}" />
                              </organisms>
                            </OTChromosomeZoom>
                            <OTChromosomeZoom local_id="samplemale_strain_plates_chromzoom">
                              <organisms>
                                <object refid="${samplemale_strain_plates}" />
                              </organisms>
                            </OTChromosomeZoom>
                            <OTChromosomeZoom local_id="samplefemale_strain_plates_chromzoom">
                              <organisms>
                                <object refid="${samplefemale_strain_plates}" />
                              </organisms>
                            </OTChromosomeZoom>
                            <OTChromosomeZoom local_id="samplefemale_strain_chromzoom">
                              <organisms>
                                <object refid="${samplefemale_strain}" />
                              </organisms>
                            </OTChromosomeZoom>
                          </documentRefs>
                        </OTUDLCompoundDoc>
                        <OTUDLCompoundDoc id="e55a0614-1d8d-11de-8216-8348550e42a0" name="%e55a0614-1d8d-11de-8216-8348550e42a0" showEditBar="true">
                          <bodyText>
                            <div class="buffer">
                              <div class="border">
                                <div class="body">
                                  <div class="subtitle">
                                    New page
                                    <br />
                                    <object refid="0949da57-1d8e-11de-8216-8348550e42a0" />
									<object refid="${pedigree-chromzoom}"/>
                                    <br />
                                  </div>
                                </div>
                              </div>
                            </div>
                          </bodyText>
                          <documentRefs>
                            <OTPedigree id="0949da57-1d8e-11de-8216-8348550e42a0" name="Pedigree" width="600" height="400" crossoverEnabled="true" organismImagesVisible="true" organismImageSize="2" sexTextVisible="true">
								<organisms>
									<object refid="${maleStrainOrganism}" />
									<object refid="${femaleStrainOrganism}" />
								</organisms>
							</OTPedigree>
							<OTChromosomeZoom local_id="pedigree-chromzoom" drawCrossover="true">
                              <organism>
                                <object refid="${maleStrainOrganism}" />
                              </organism>
                              <listenTo>
                                <object refid="0949da57-1d8e-11de-8216-8348550e42a0" />
                              </listenTo>
                            </OTChromosomeZoom>
                          </documentRefs>
                        </OTUDLCompoundDoc>
                      </cards>
                      <currentCard>
                        <object refid="e55a0614-1d8d-11de-8216-8348550e42a0" />
                      </currentCard>
                      <viewedCards>
                        <object refid="f69b9731-79bb-11dd-b6e3-bdb383ed1215" />
                        <object refid="${section-4-page-1}" />
                        <object refid="${section-4-page-2}" />
                        <object refid="${section-4-page-2}" />
                        <object refid="${section-4-page-3}" />
                        <object refid="${section-4-page-3}" />
                        <object refid="${section-4-page-3}" />
                        <object refid="${section-4-page-3}" />
                        <object refid="${section-4-page-3}" />
                        <object refid="e55a0614-1d8d-11de-8216-8348550e42a0" />
                        <object refid="e55a0614-1d8d-11de-8216-8348550e42a0" />
                        <object refid="e55a0614-1d8d-11de-8216-8348550e42a0" />
                        <object refid="e55a0614-1d8d-11de-8216-8348550e42a0" />
                        <object refid="e55a0614-1d8d-11de-8216-8348550e42a0" />
                      </viewedCards>
                    </OTCardContainer>
                  </content>
                  <header>
                    <OTUDLCompoundDoc id="f69b9733-79bb-11dd-b6e3-bdb383ed1215" name="%f69b9733-79bb-11dd-b6e3-bdb383ed1215" showEditBar="false">
                      <bodyText>
                        <div class="title">Section 4</div>
                      </bodyText>
                    </OTUDLCompoundDoc>
                  </header>
                  <footer>
                    <object refid="${nav-bar}" />
                  </footer>
                  <north>
                    <object refid="f69b9733-79bb-11dd-b6e3-bdb383ed1215" />
                  </north>
                  <center>
                    <object refid="f69b9732-79bb-11dd-b6e3-bdb383ed1215" />
                  </center>
                  <south>
                    <object refid="${nav-bar}" />
                  </south>
                </OTUDLSection>
              </cards>
              <currentCard>
                <object refid="${section-4}" />
              </currentCard>
              <viewedCards>
                <object refid="${section-1}" />
                <object refid="${section-1}" />
                <object refid="${section-4}" />
                <object refid="${section-4}" />
                <object refid="${section-4}" />
                <object refid="${section-4}" />
                <object refid="${section-4}" />
              </viewedCards>
            </OTCardContainer>
          </content>
          <script>
            <OTScriptObject>
              <variables>
                <OTScriptVariable name="cardContainer">
                  <reference>
                    <object refid="${section-card-container}" />
                  </reference>
                </OTScriptVariable>
                <OTScriptVariable name="system">
                  <reference>
                    <object refid="${system}" />
                  </reference>
                </OTScriptVariable>
                <OTScriptVariable name="menuPageRule">
                  <reference>
                    <object refid="${page-rule}" />
                  </reference>
                </OTScriptVariable>
                <OTScriptVariable name="sampleMenu">
                  <reference>
                    <object refid="${menu}" />
                  </reference>
                </OTScriptVariable>
                <OTScriptVariable name="menuHorizontalView">
                  <reference>
                    <object refid="29dc5ef0-c453-11dc-95ff-0800200c9a66" />
                  </reference>
                </OTScriptVariable>
                <OTScriptVariable name="album">
                  <reference>
                    <object refid="${album}" />
                  </reference>
                </OTScriptVariable>
              </variables>
              <script>
                <object refid="${authoring_script.js}" />
              </script>
              <scriptState />
            </OTScriptObject>
          </script>
        </OTUDLContainer>
      </root>
      <library>
        <OTUDLNavBar local_id="nav-bar">
          <album>
            <object refid="${album}" />
          </album>
          <menuView>
            <object refid="29dc5ef0-c453-11dc-95ff-0800200c9a66" />
          </menuView>
          <menuRule>
            <object refid="${page-rule}" />
          </menuRule>
          <cssColor>
            <object refid="31193bb0-c44f-11dc-95ff-0800200c9a66" />
          </cssColor>
        </OTUDLNavBar>
        <OTUDLMenu local_id="menu">
          <cardContainer>
            <object refid="${section-card-container}" />
          </cardContainer>
          <menuRule>
            <object refid="${section-rule}" />
          </menuRule>
          <css>
            <object refid="31193bb0-c44f-11dc-95ff-0800200c9a66" />
          </css>
        </OTUDLMenu>
        <OTUDLMenu local_id="section-1-menu">
          <cardContainer>
            <object refid="${section-1-card-container}" />
          </cardContainer>
          <menuRule>
            <object refid="${page-rule}" />
          </menuRule>
        </OTUDLMenu>
        <OTSnapshotAlbum local_id="album" />
        <OTDefinitionManager local_id="definition-manager">
          <definitions>
            <OTDefinitionList src="http://continuum.concord.org/otrunk/examples/LOOPS/glossary/common-glossary.txt" />
          </definitions>
          <frame>
            <OTFrame local_id="definition_frame" width="300" height="190" borderlessPopup="true" />
          </frame>
        </OTDefinitionManager>
        <OTUDLMenuRule local_id="page-rule" jumpToViewedCard="true" stepAhead="true" />
        <OTUDLMenuRule local_id="section-rule" jumpToAnyCard="true" />
        <OTJavascript local_id="change_page.js" src="http://continuum.concord.org/otrunk/examples/LOOPS/scripts/change_page.js" />
        <OTJavascript local_id="show_message.js" src="http://continuum.concord.org/otrunk/examples/LOOPS/scripts/show_message.js" />
        <OTJavascript local_id="authoring_script.js" src="http://continuum.concord.org/otrunk/examples/LOOPS/scripts/authoring_script.js" />
      </library>
    </OTSystem>
  </objects>
</otrunk>

