<?xml version="1.0" encoding="UTF-8"?>
<otrunk id="fba5ef80-db43-11dc-95ff-0800200c9a66">
  <imports>
    <import class="org.concord.data.state.OTDataChannelDescription" />
    <import class="org.concord.data.state.OTDataColumnDescription" />
    <import class="org.concord.data.state.OTDataColumnDescription" />
    <import class="org.concord.data.state.OTDataField" />
    <import class="org.concord.data.state.OTDataStore" />
    <import class="org.concord.data.state.OTDataTable" />
    <import class="org.concord.data.state.OTDataTable" />
    <import class="org.concord.data.state.OTPropertyDataProducer" />
    <import class="org.concord.data.state.OTWaveGenerator" />
    <import class="org.concord.datagraph.state.OTDataAxis" />
    <import class="org.concord.datagraph.state.OTDataBarGraphable" />
    <import class="org.concord.datagraph.state.OTDataCollector" />
    <import class="org.concord.datagraph.state.OTDataGraph" />
    <import class="org.concord.datagraph.state.OTDataGraphable" />
    <import class="org.concord.datagraph.state.OTDataPointLabel" />
    <import class="org.concord.datagraph.state.OTDataPointRuler" />
    <import class="org.concord.datagraph.state.OTMultiDataGraph" />
    <import class="org.concord.datagraph.state.OTPluginView" />
    <import class="org.concord.examples.smartgraph.OTDataFilterScript" />
    <import class="org.concord.framework.otrunk.view.OTFrame" />
    <import class="org.concord.graph.util.state.OTDrawingImageIcon" />
    <import class="org.concord.graph.util.state.OTDrawingShape" />
    <import class="org.concord.graph.util.state.OTDrawingStamp" />
    <import class="org.concord.graph.util.state.OTDrawingTool" />
    <import class="org.concord.graph.util.state.OTDrawingTool2" />
    <import class="org.concord.graph.util.state.OTPointTextLabel" />
    <import class="org.concord.otrunk.browser.mozswing.OTMozSwing" />
    <import class="org.concord.otrunk.graph.OTDataCollectorViewConfig" />
    <import class="org.concord.otrunk.OTInclude" />
    <import class="org.concord.otrunk.OTProperty" />
    <import class="org.concord.otrunk.OTProperty" />
    <import class="org.concord.otrunk.OTSystem" />
    <import class="org.concord.otrunk.script.jruby.OTJRuby" />
    <import class="org.concord.otrunk.script.js.OTJavascript" />
    <import class="org.concord.otrunk.script.OTScript" />
    <import class="org.concord.otrunk.script.OTScriptEngineBundle" />
    <import class="org.concord.otrunk.script.OTScriptEngineEntry" />
    <import class="org.concord.otrunk.script.ui.OTScriptObject" />
    <import class="org.concord.otrunk.script.ui.OTScriptVariable" />
    <import class="org.concord.otrunk.ui.OTButton" />
    <import class="org.concord.otrunk.ui.OTCardContainer" />
    <import class="org.concord.otrunk.ui.OTChoice" />
    <import class="org.concord.otrunk.ui.OTChoiceMultiple" />
    <import class="org.concord.otrunk.ui.OTImage" />
    <import class="org.concord.otrunk.ui.OTModeSwitcher" />
    <import class="org.concord.otrunk.ui.OTSoundPlayer" />
    <import class="org.concord.otrunk.ui.OTText" />
    <import class="org.concord.otrunk.ui.snapshot.OTSnapshot" />
    <import class="org.concord.otrunk.ui.snapshot.OTSnapshotAlbum" />
    <import class="org.concord.otrunk.ui.snapshot.OTSnapshotButton" />
    <import class="org.concord.otrunk.ui.snapshot.OTSnapshotChooser" />
    <import class="org.concord.otrunk.ui.swing.OTChoiceViewConfig" />
    <import class="org.concord.otrunk.util.OTSharingBundle" />
    <import class="org.concord.otrunk.view.document.edit.OTDocumentEditViewConfig" />
    <import class="org.concord.otrunk.view.document.OTCompoundDoc" />
    <import class="org.concord.otrunk.view.document.OTCssText" />
    <import class="org.concord.otrunk.view.document.OTDocumentViewConfig" />
    <import class="org.concord.otrunk.view.OTFolderObject" />
    <import class="org.concord.otrunk.view.OTViewBundle" />
    <import class="org.concord.otrunk.view.OTViewChild" />
    <import class="org.concord.otrunk.view.OTViewEntry" />
    <import class="org.concord.otrunk.view.OTViewMode" />
    <import class="org.concord.otrunk.view.OTViewService" />
    <import class="org.concord.otrunk.view.prototype.OTPrototypeEventController" />
    <import class="org.concord.otrunk.view.prototype.OTPrototypeMapEntry" />
    <import class="org.concord.otrunk.view.prototype.OTPrototypeViewEntry" />
    <import class="org.concord.otrunkmw.OTModelerPage" />
    <import class="org.concord.otrunknl4.OTNLogoModel" />
    <import class="org.concord.sensor.state.OTDeviceConfig" />
    <import class="org.concord.sensor.state.OTExperimentRequest" />
    <import class="org.concord.sensor.state.OTInterfaceManager" />
    <import class="org.concord.sensor.state.OTSensorDataProxy" />
    <import class="org.concord.sensor.state.OTSensorRequest" />
    <import class="org.concord.sensor.state.OTZeroSensor" />
    <import class="org.concord.smartgraph.OTDataStoreFilter" />
    <import class="org.concord.smartgraph.OTDataStoreFilter" />
    <import class="org.concord.smartgraph.OTDataStoreFilterDescription" />
    <import class="org.concord.smartgraph.OTDataStoreFilterDescription" />
    <import class="org.concord.otrunk.ui.OTBorderContainer" />
    <import class="org.concord.otrunk.udl3.OTUDLMenu" />
    <import class="org.concord.otrunk.udl.OTUDLMenuRule" />
    <import class="org.concord.datagraph.state.OTDataCollectorDataStore" />
    <import class="org.concord.otrunk.biologica.OTBreedOffspring" />
    <import class="org.concord.otrunk.biologica.OTOrganism" />
    <import class="org.concord.otrunk.biologica.OTWorld" />
    <import class="org.concord.otrunk.biologica.OTChromosome" />
    <import class="org.concord.otrunk.biologica.OTStaticOrganism" />
    <import class="org.concord.otrunk.biologica.OTSex" />
    <import class="org.concord.otrunk.ui.OTChoiceWithFeedback" />
  </imports>
  <objects>
    <OTSystem local_id="system">
      <includes>
        <OTInclude href="http://continuum.concord.org/otrunk/examples/UDL/global-imports/predefined-sensor-graphs.otml" />
      </includes>
      <bundles>
        <OTViewBundle id="8d880970-c22a-11dc-95ff-0800200c9a66" showLeftPanel="false" currentMode="student">
          <modes>
            <OTViewMode name="authoring">
              <map>
                <entry key="${moz-swing-view}">
                  <OTViewEntry objectClass="org.concord.otrunk.browser.mozswing.OTMozSwing" viewClass="org.concord.otrunk.browser.mozswing.OTMozSwingEditView" />
                </entry>
                <entry key="${snapshot_button_view}">
                  <OTViewEntry objectClass="org.concord.otrunk.ui.snapshot.OTSnapshotButton" viewClass="org.concord.otrunk.ui.snapshot.OTSnapshotButtonEditView" />
                </entry>
                <entry key="${choice-radio-view}">
                  <OTChoiceViewConfig objectClass="org.concord.otrunk.ui.OTChoice" viewClass="org.concord.otrunk.ui.swing.OTChoiceComboBoxEditView" useViewsAsChoices="true" />
                </entry>
                <entry key="${choice-checkbox-view}">
                  <OTChoiceViewConfig objectClass="org.concord.otrunk.ui.OTChoiceMultiple" viewClass="org.concord.otrunk.ui.swing.OTChoiceComboBoxEditView" useViewsAsChoices="true" />
                </entry>
                <entry key="${data-table-view}">
                  <OTViewEntry objectClass="org.concord.data.state.OTDataTable" viewClass="org.concord.otrunk.ui.swing.OTDataTableEditView" />
                </entry>
                <entry key="${netlogo-view}">
                  <OTViewEntry viewClass="org.concord.otrunknl4.OTNLogoModelEditView" objectClass="org.concord.otrunknl4.OTNLogoModel" />
                </entry>
                <entry key="${compound-doc-view}">
                  <OTDocumentEditViewConfig objectClass="org.concord.otrunk.view.document.OTCompoundDoc" viewClass="org.concord.otrunk.view.document.edit.OTDocumentEditView">
                    <documentViewConfig>
                      <object refid="${compound-doc-view}" />
                    </documentViewConfig>
                    <objectsToInsert>
                      <OTText name="Text field" />
                      <OTDrawingTool2 name="Draw tool" />
                      <OTChoice name="Multiple-choice (single answer)" alignContent="0">
                        <choices>
                          <OTCompoundDoc name="Dominant">
                            <bodyText>Dominant</bodyText>
                          </OTCompoundDoc>
                          <OTCompoundDoc name="Recessive">
                            <bodyText>Recessive</bodyText>
                          </OTCompoundDoc>
                          <OTCompoundDoc name="Neither">
                            <bodyText>Neither</bodyText>
                          </OTCompoundDoc>
                        </choices>
                      </OTChoice>
                      <OTChoiceMultiple name="Multiple-choice (check boxes)" />
                      <OTDataTable name="Data table" showLastRowForAddingNew="true">
                        <dataStore>
                          <OTDataStore numberChannels="2" />
                        </dataStore>
                      </OTDataTable>
                      <OTDataCollector name="Data graph" title="Data graph">
                        <source>
                          <OTDataGraphable name="Data Graph" connectPoints="true" controllable="true" yColumn="1" drawMarks="false" color="16711680" xColumn="0" lineWidth="2.0">
                            <dataStore>
                              <OTDataStore />
                            </dataStore>
                          </OTDataGraphable>
                        </source>
                        <xDataAxis>
                          <OTDataAxis max="60.0" units="s" min="0.0" label="Time" />
                        </xDataAxis>
                        <yDataAxis>
                          <OTDataAxis max="40.0" units="" min="-0.0" label="" />
                        </yDataAxis>
                      </OTDataCollector>
                      <OTSnapshotButton name="Snapshot button" />
                      <OTSnapshotChooser name="Snapshot chooser" />
                      <OTMozSwing name="Web browser" />
                      <OTSoundPlayer name="Sound player" />
                      <OTModelerPage name="Molecular workbench" authoredDataURL="http://mw2.concord.org/public/student/classic/motion/undershotwaterwheel.cml" />
                      <OTNLogoModel name="NetLogo model" />
                    </objectsToInsert>
                  </OTDocumentEditViewConfig>
                </entry>
                <entry key="${data-collector-view}">
                  <OTDataCollectorViewConfig viewClass="org.concord.otrunk.graph.OTDataCollectorEditView" objectClass="org.concord.datagraph.state.OTDataCollector">
                    <predefinedGraphs>
                      <object refid="088786c2-8719-11dc-8314-0800200c9a66" />
                    </predefinedGraphs>
                  </OTDataCollectorViewConfig>
                </entry>
                <entry key="${drawing-view}">
                  <OTViewEntry viewClass="org.concord.datagraph.state.OTDataDrawingToolEditView" objectClass="org.concord.graph.util.state.OTDrawingTool" />
                </entry>
                <entry key="${text-edit}">
                  <OTViewEntry objectClass="org.concord.otrunk.ui.OTText" viewClass="org.concord.otrunk.ui.swing.OTTextEditEditView" />
                </entry>
                <entry key="${sound-player-view}">
                  <OTViewEntry objectClass="org.concord.otrunk.ui.OTSoundPlayer" viewClass="org.concord.otrunk.ui.swing.OTSoundPlayerEditView" />
                </entry>
                <entry key="${mw-view}">
                  <OTViewEntry objectClass="org.concord.otrunkmw.OTModelerPage" viewClass="org.concord.otrunkmw.OTModelerPageEditView" />
                </entry>
                <entry key="${menu-horizontal-circle}">
                  <OTViewEntry objectClass="org.concord.otrunk.udl3.OTUDLMenu" viewClass="org.concord.otrunk.udl.ui.OTUDLMenuPageEditView" />
                </entry>
                <entry key="${mode-switcher}">
                  <OTViewEntry objectClass="org.concord.otrunk.ui.OTModeSwitcher" viewClass="org.concord.otrunk.ui.swing.OTModeSwitcherView" />
                </entry>
              </map>
            </OTViewMode>
            <OTViewMode name="student">
              <map />
            </OTViewMode>
          </modes>
          <frame>
            <OTFrame useScrollPane="false" width="1000" height="650" positionX="20" positionY="40" />
          </frame>
          <views>
            <OTViewEntry objectClass="org.concord.otrunk.script.ui.OTScriptObject" viewClass="org.concord.otrunk.script.ui.OTScriptObjectView" />
            <OTViewEntry local_id="mw-view" objectClass="org.concord.otrunkmw.OTModelerPage" viewClass="org.concord.otrunkmw.OTModelerPageView" />
            <OTViewEntry objectClass="org.concord.otrunk.OTIncludeRootObject" viewClass="org.concord.otrunk.OTIncludeRootObjectView" />
            <OTViewEntry local_id="moz-swing-view" objectClass="org.concord.otrunk.browser.mozswing.OTMozSwing" viewClass="org.concord.otrunk.browser.mozswing.OTMozSwingView" />
            <OTViewEntry local_id="mode-switcher" objectClass="org.concord.otrunk.ui.OTModeSwitcher" viewClass="org.concord.otrunk.ui.swing.OTModeSwitcherBypassView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTImage" viewClass="org.concord.otrunk.ui.swing.OTImageView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTModeSwitcher" viewClass="org.concord.otrunk.ui.swing.OTModeSwitcherView" />
            <OTViewEntry local_id="snapshot_button_view" objectClass="org.concord.otrunk.ui.snapshot.OTSnapshotButton" viewClass="org.concord.otrunk.ui.snapshot.OTSnapshotButtonView" />
            <OTViewEntry local_id="snapshot-chooser-view" objectClass="org.concord.otrunk.ui.snapshot.OTSnapshotChooser" viewClass="org.concord.otrunk.ui.snapshot.OTSnapshotChooserView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.snapshot.OTSnapshotAlbum" viewClass="org.concord.otrunk.ui.snapshot.OTSnapshotAlbumView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTButton" viewClass="org.concord.otrunk.ui.swing.OTButtonView" />
            <OTChoiceViewConfig local_id="choice-checkbox-view" objectClass="org.concord.otrunk.ui.OTChoiceMultiple" viewClass="org.concord.otrunk.ui.swing.OTChoiceCheckBoxView" useViewsAsChoices="true" />
            <OTChoiceViewConfig local_id="choice-radio-view" objectClass="org.concord.otrunk.ui.OTChoice" viewClass="org.concord.otrunk.ui.swing.OTChoiceRadioButtonView" useViewsAsChoices="true" />
            <OTViewEntry id="453a61b0-e18b-11dc-95ff-0800200c9a66" objectClass="org.concord.otrunk.ui.OTChoice" viewClass="org.concord.otrunk.ui.swing.OTChoiceComboBoxView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTCardContainer" viewClass="org.concord.otrunk.ui.swing.OTCardContainerView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTBorderContainer" viewClass="org.concord.otrunk.ui.swing.OTBorderContainerView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTPlacementContainer" viewClass="org.concord.otrunk.ui.swing.OTPlacementContainerView" />
            <OTViewEntry local_id="text-edit" objectClass="org.concord.otrunk.ui.OTText" viewClass="org.concord.otrunk.ui.swing.OTTextEditView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTText" viewClass="org.concord.otrunk.ui.swing.OTTextView" />
            <OTViewEntry local_id="data-collector-view" viewClass="org.concord.datagraph.state.OTDataCollectorView" objectClass="org.concord.datagraph.state.OTDataCollector" />
            <OTViewEntry viewClass="org.concord.datagraph.state.OTDataGraphView" objectClass="org.concord.datagraph.state.OTDataGraph" />
            <OTViewEntry viewClass="org.concord.data.state.OTDataFieldView" objectClass="org.concord.data.state.OTDataField" />
            <OTViewEntry local_id="drawing-view" viewClass="org.concord.datagraph.state.OTDataDrawingToolView" objectClass="org.concord.graph.util.state.OTDrawingTool" />
            <OTViewEntry viewClass="org.concord.datagraph.state.OTMultiDataGraphView" objectClass="org.concord.datagraph.state.OTMultiDataGraph" />
            <OTViewEntry local_id="data-table-view" objectClass="org.concord.data.state.OTDataTable" viewClass="org.concord.data.state.OTDataTableView" />
            <OTViewEntry local_id="netlogo-view" viewClass="org.concord.otrunknl4.OTNLogoModelView" objectClass="org.concord.otrunknl4.OTNLogoModel" />
            <OTViewEntry local_id="sound-player-view" objectClass="org.concord.otrunk.ui.OTSoundPlayer" viewClass="org.concord.otrunk.ui.swing.OTSoundPlayerView" />
<<<<<<< HEAD:Geniquest/multi-page-GQ-activity-2.otml
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTBreedOffspring" viewClass="org.concord.otrunk.biologica.ui.OTBreedOffspringView" />
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTSex" viewClass="org.concord.otrunk.biologica.ui.OTSexView" />
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTChromosome" viewClass="org.concord.otrunk.biologica.ui.OTChromosomeView" />
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTStaticOrganism" viewClass="org.concord.otrunk.biologica.ui.OTStaticOrganismView" />
=======
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTBreedOffspring" viewClass="org.concord.otrunk.biologica.ui.OTBreedOffspringView" />
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTSex" viewClass="org.concord.otrunk.biologica.ui.OTSexView" />
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTChromosome" viewClass="org.concord.otrunk.biologica.ui.OTChromosomeView" />
            <OTViewEntry objectClass="org.concord.otrunk.biologica.OTStaticOrganism" viewClass="org.concord.otrunk.biologica.ui.OTStaticOrganismView" />
>>>>>>> 2ef16db80574f4a3c07a7e9a592a7f44f9f3b831:Geniquest/multi-page-GQ-activity-2.otml
            <OTViewEntry local_id="choice_feedback_radio_view" objectClass="org.concord.otrunk.ui.OTChoiceWithFeedback" viewClass="org.concord.otrunk.ui.swing.OTChoiceRadioButtonWithFeedbackView" />
            <OTDocumentViewConfig local_id="compound-doc-view" objectClass="org.concord.otrunk.view.document.OTCompoundDoc" viewClass="org.concord.otrunk.view.document.OTDocumentView">
              <cssBlocks>
                <OTCssText cssText="                 body {        font-size: 18;        FONT-STYLE: normal;        FONT-FAMILY: Verdana, Arial;        FONT-VARIANT: normal;       TEXT-DECORATION: none     }" />
              </cssBlocks>
            </OTDocumentViewConfig>
            <OTViewEntry objectClass="org.concord.graph.util.state.OTDrawingTool2" viewClass="org.concord.datagraph.state.OTDataDrawingToolView" />
            <OTViewEntry local_id="menu-horizontal-circle" objectClass="org.concord.otrunk.udl3.OTUDLMenu" viewClass="org.concord.otrunk.udl.ui.OTUDLMenuPageView" />
            <OTViewEntry objectClass="org.concord.otrunk.ui.OTBorderContainer" viewClass="org.concord.otrunk.ui.swing.OTBorderContainerView" />
          </views>
        </OTViewBundle>
        <OTScriptEngineBundle>
          <engines>
            <OTScriptEngineEntry objectClass="org.concord.otrunk.script.js.OTJavascript" engineClass="org.concord.otrunk.script.js.OTJavascriptEngine" />
            <OTScriptEngineEntry objectClass="org.concord.otrunk.script.jruby.OTJRuby" engineClass="org.concord.otrunk.script.jruby.OTJRubyEngine" />
          </engines>
        </OTScriptEngineBundle>
        <OTSharingBundle>
          <sharedObjects>
            <object refid="b9f16067-204c-11dd-b9fc-a3ab42a2d8df" />
            <object refid="afb9fbe3-21ed-11dd-a687-771073841843" />
          </sharedObjects>
        </OTSharingBundle>
        <OTInterfaceManager>
          <deviceConfigs>
            <OTDeviceConfig configString="none" deviceId="10" />
          </deviceConfigs>
        </OTInterfaceManager>
      </bundles>
      <root>
        <OTModeSwitcher>
          <otObject>
            <OTBorderContainer>
              <center>
                <OTCardContainer local_id="section-2-card-container" contentsMayScroll="true" loadViewOnlyOnDemand="true">
                  <cards>
                    <OTCompoundDoc local_id="page-1" name="1">
                      <bodyText>
                        This view shows the dragons from the previous page together with their chromosomes. (Make sure to scroll down to see the entire set of chromosomes for each dragon.)
                        Change the genes and look at the dragons' features.
                        <table>
                          <tr height="310">
                            <td width="250">
                              <object refid="${maleStaticOrganism}" />
                            </td>
                            <td width="630">
                              <object refid="${maleChromosome}" />
                            </td>
                          </tr>
                          <tr>
                            <td>
                              <object refid="${femaleStaticOrganism}" />
                            </td>
                            <td>
                              <object refid="${femaleChromosome}" />
                            </td>
                          </tr>
                        </table>
                        Which combinations of genes will cause a dragon to have wings?
                        <object refid="${wings_heredity_choice2}" viewid="${choice_feedback_radio_view}"/>
                      </bodyText>
                      <documentRefs>
                        <OTChromosome local_id="maleChromosome"
                          name="maleChromosome" width="630" height="310">
                          <organism>
                            <object refid="${maleOrganism}" />
                          </organism>
                        </OTChromosome>
                        <OTChromosome local_id="femaleChromosome"
                          name="femaleChromosome" width="630" height="310">
                          <organism>
                            <object refid="${femaleOrganism}" />
                          </organism>
                        </OTChromosome>
                        <OTStaticOrganism local_id="maleStaticOrganism"
                          name="maleStaticOrganism">
                          <organism>
                            <object refid="${maleOrganism}" />
                          </organism>
                        </OTStaticOrganism>
                        <OTStaticOrganism local_id="femaleStaticOrganism"
                          name="femaleStaticOrganism">
                          <organism>
                            <object refid="${femaleOrganism}" />
                          </organism>
                        </OTStaticOrganism>
                        <OTChoiceWithFeedback local_id="wings_heredity_choice2">
                          <choices>
                            <OTText name="Only WW" />
                            <OTText name="Either Ww or wW" />
                            <OTText local_id="correct_choice_3" name="Only ww" />
                            <OTText name="Either Ww, wW or WW" />
                          </choices>
                          <correctChoice>
                            <object refid="${correct_choice_3}" />
                          </correctChoice>
                          <immediateFeedback>false</immediateFeedback>
                        </OTChoiceWithFeedback>
                      </documentRefs>
                    </OTCompoundDoc>
                    <OTCompoundDoc local_id="page-2" name="2">
                      <bodyText>
                        Now try changing genes to affect the dragons' tails.
                        <table>
                          <tr height="310">
                            <td width="250">
                              <object refid="${maleStaticOrganism}" />
                            </td>
                            <td width="630">
                              <object refid="${maleChromosome}" />
                            </td>
                          </tr>
                          <tr>
                            <td>
                              <object refid="${femaleStaticOrganism}" />
                            </td>
                            <td>
                              <object refid="${femaleChromosome}" />
                            </td>
                          </tr>
                        </table>
                        Which combinations of genes will cause a dragon to have a fancy tail?
                        <object refid="${tails_heredity_choice2}" viewid="${choice_feedback_radio_view}"/>
                      </bodyText>
                      <documentRefs>
                        <OTOrganism local_id="maleOrganism">
                          <name>male</name>
                          <sex>0</sex>
                          <world>
                            <OTWorld local_id="dragon_world" speciesPath="org/concord/biologica/worlds/dragonmarkers.xml" />
                          </world>
                          <alleles>b:h,a:h,b:S,a:S,b:W,a:w,b:l,a:L,b:t,a:t,a:p,a:f,a:a,a:B</alleles>
                        </OTOrganism>
                        <OTOrganism local_id="femaleOrganism">
                          <name>female</name>
                          <sex>1</sex>
                          <world>
                            <object refid="${dragon_world}" />
                          </world>
                          <alleles>b:h,a:h,b:S,a:S,b:W,a:W,b:l,a:L,b:t,a:T,b:p,a:p,b:F,a:F,b:A,a:a,b:B,a:B</alleles>
                        </OTOrganism>
                        <OTStaticOrganism local_id="maleStaticOrganism"
                          name="maleStaticOrganism">
                          <organism>
                            <object refid="${maleOrganism}" />
                          </organism>
                        </OTStaticOrganism>
                        <OTStaticOrganism local_id="femaleStaticOrganism"
                          name="femaleStaticOrganism">
                          <organism>
                            <object refid="${femaleOrganism}" />
                          </organism>
                        </OTStaticOrganism>
                        <OTChoiceWithFeedback local_id="tails_heredity_choice2">
                          <choices>
                            <OTText name="Only TT" />
                            <OTText name="Either Tt or tT" />
                            <OTText name="Only tt" />
                            <OTText local_id="correct_choice_4" name="Either Tt, tT or TT" />
                          </choices>
                          <correctChoice>
                            <object refid="${correct_choice_4}" />
                          </correctChoice>
                          <immediateFeedback>false</immediateFeedback>
                        </OTChoiceWithFeedback>
                      </documentRefs>
                    </OTCompoundDoc>
                  </cards>
                  <currentCard>
                    <object refid="page-1" />
                  </currentCard>
                  <viewedCards>
                    <object refid="${page-1}" />
                  </viewedCards>
                </OTCardContainer>
              </center>
              <south>
                <OTCompoundDoc showEditBar="false">
                  <bodyText>
                    <div align="center">
                      <table>
                        <tr>
                          <td>
                            <object refid="${section-2-menu}" />
                          </td>
                        </tr>
                      </table>
                    </div>
                  </bodyText>
                </OTCompoundDoc>
              </south>
            </OTBorderContainer>
          </otObject>
        </OTModeSwitcher>
      </root>
      <library>
        <!-- Organism definitions -->
        <OTStaticOrganism local_id="staticFatherView" name="staticFatherView">
          <organism>
            <object refid="${staticFather}" />
          </organism>
        </OTStaticOrganism>
        <OTStaticOrganism local_id="staticMotherView" name="staticMotherView">
          <organism>
            <object refid="${staticMother}" />
          </organism>
        </OTStaticOrganism>
        <OTOrganism local_id="staticFather">
          <name>Molthwan</name>
          <sex>0</sex>
          <world>
            <object refid="${dragon_world}" />
          </world>
          <alleles>b:h,a:h,b:S,a:S,b:w,a:w,b:l,a:l,b:T,a:t,a:p,a:f,a:a,a:B</alleles>
        </OTOrganism>
        <OTOrganism local_id="staticMother">
          <name>Lucenne</name>
          <sex>1</sex>
          <world>
            <object refid="${dragon_world}" />
          </world>
          <alleles>b:h,a:h,b:S,a:S,b:W,a:w,b:L,a:L,b:t,a:T,b:p,a:p,b:F,a:F,b:a,a:a,b:B,a:B</alleles>
        </OTOrganism>
        <OTUDLMenu local_id="section-2-menu">
          <cardContainer>
            <object refid="${section-2-card-container}" />
          </cardContainer>
          <menuRule>
            <object refid="${page-rule}" />
          </menuRule>
        </OTUDLMenu>
        <OTUDLMenuRule local_id="page-rule" jumpToViewedCard="true" stepAhead="true" />
        <OTDataCollector id="b9f16067-204c-11dd-b9fc-a3ab42a2d8df" name="ObjectMotion1">
          <source>
            <OTDataGraphable name="Object Graph" connectPoints="true" controllable="false" yColumn="1" drawMarks="true" color="16711680" xColumn="0" lineWidth="2.0">
              <dataStore>
                <OTDataStore local_id="datastore_01" numberChannels="2">
                  <values>
                    <float>0.0</float>
                    <float>0.5</float>
                    <float>1.0</float>
                    <float>0.7</float>
                    <float>2.0</float>
                    <float>0.9</float>
                    <float>3.0</float>
                    <float>1.1</float>
                    <float>4.0</float>
                    <float>1.3</float>
                    <float>5.0</float>
                    <float>1.5</float>
                    <float>6.0</float>
                    <float>1.7</float>
                    <float>7.0</float>
                    <float>1.9</float>
                    <float>8.0</float>
                    <float>2.1</float>
                    <float>9.0</float>
                    <float>2.3</float>
                  </values>
                </OTDataStore>
              </dataStore>
            </OTDataGraphable>
          </source>
          <xDataAxis>
            <OTDataAxis local_id="standard_x_axis" max="20.0" units="s" min="0.0" label="Time" />
          </xDataAxis>
          <yDataAxis>
            <OTDataAxis local_id="standard_y_axis" max="3.25" units="m" min="-0.0" label="Distance" />
          </yDataAxis>
        </OTDataCollector>
        <OTDataFilterScript local_id="datafilter_01">
          <description>
            <OTDataStoreFilterDescription operation="custom script" />
          </description>
          <filterScript>
            <object refid="${script_02}" />
          </filterScript>
          <inputDataStore>
            <object refid="${datastore_01}" />
          </inputDataStore>
        </OTDataFilterScript>
        <OTJavascript local_id="script_01">
          <script>importClass(Packages.java.lang.System);
              importClass(Packages.java.lang.Float);
              /** 
              * This function returns the y value of the filter 
              */ 
              function filterYValue(x, y) { 
                return y + 1;
                //return y + 10; 
                // original y value + 10 
                //return y - y/2; 
              }</script>
        </OTJavascript>
        <OTJRuby local_id="script_02">
          <script># 
              # This function returns the y value of the filter 
              # 
              require 'java' 
              def self.filterYValue(x, y) 
              y + 1 
              end</script>
        </OTJRuby>
        <OTScriptObject local_id="script_03">
          <variables>
            <OTScriptVariable name="datastore_02" />
            <OTScriptVariable name="displayText">
              <reference>
                <object refid="${script_03_text_object}" />
              </reference>
            </OTScriptVariable>
          </variables>
          <script>
            <OTJRuby>
              <script># 
                  # This is intended to subtract 0.25 from the Y values of datastore_02 ... someday 
                  # The variables passed in are referenced in JRuby as global variables. 
                  # That's why they are prefixed with the '$' character below.
                  #
                  require 'java' 
                  def self.init 
                    require 'rbconfig'
                    display = "" 
                    display += "Ruby version: JRuby #{RUBY_VERSION} (#{RUBY_RELEASE_DATE} [i386-jruby#{JRUBY_VERSION}]" 
                    display += ",platform: Java, version #{java.lang.System.getProperty('java.version')}" + "\n\n" 
                    display += "self.methods: " + self.methods.join(', ') + "\n\n" 
                    display += "$datastore_02.inspect: " + $datastore_02.inspect + "\n\n" 
                    display += "getNumberChannels: " + $datastore_02.getNumberChannels.to_s + "\n\n" 
                    display += "getValues.get(0): " + $datastore_02.getValues.get(0).to_s + "\n\n" 
                    display += "getValues.get(1): " + $datastore_02.getValues.get(1).to_s + "\n\n"
                    display += "getValues.set(1, java.lang.Float.new(0.75)) \n"
                    $datastore_02.getValues.set(1, java.lang.Float.new(0.75))
                    $displayText.setText(display) # puts self.methods.join(', ') 
                  end</script>
            </OTJRuby>
          </script>
        </OTScriptObject>
        <OTText local_id="script_03_text_object" />
      </library>
    </OTSystem>
  </objects>
</otrunk>

