<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE otrunk [
<!ENTITY telslogo "<p align='center'><img src='http://www.telscenter.org/images/logo_home.jpg' /><br/></p>">
]>
<otrunk id="33754150-b594-11d9-9669-0800200c9a66">
    <imports>
        <import class="org.concord.otrunk.OTSystem" />
        <import class="org.concord.otrunk.view.OTViewEntry" />
        <import class="org.concord.otrunk.view.OTViewBundle" />
        <import class="org.concord.otrunk.biologica.OTChromosome" />
        <import class="org.concord.otrunk.biologica.OTStaticOrganism" />
        <import class="org.concord.otrunk.biologica.OTOrganism" />
        <import class="org.concord.otrunk.biologica.OTWorld" />
        <import class="org.concord.otrunk.biologica.OTSex" />
        <import class="org.concord.otrunk.view.document.OTCompoundDoc" />
    </imports>

    <objects>
        <OTSystem>

            <bundles>
                <OTViewBundle showLeftPanel="false">
                    <viewEntries>
                        <OTViewEntry objectClass="org.concord.otrunk.biologica.OTSex"
                            viewClass="org.concord.otrunk.biologica.ui.OTSexView" />
                        <OTViewEntry objectClass="org.concord.otrunk.biologica.OTChromosome"
                            viewClass="org.concord.otrunk.biologica.ui.OTChromosomeView" />
                        <OTViewEntry objectClass="org.concord.otrunk.biologica.OTStaticOrganism"
                            viewClass="org.concord.otrunk.biologica.ui.OTStaticOrganismView" />
                        <OTViewEntry objectClass="org.concord.otrunk.view.document.OTDocument"
                            viewClass="org.concord.otrunk.view.document.OTDocumentView" />
                    </viewEntries>
                </OTViewBundle>
            </bundles>

            <root>
                <OTCompoundDoc name="Static Organisms">
                    <bodyText>
                        <table>
                            <tr>
                                <td>
                                    <table>
                                        <tr height="620">
                                            <td width="880">
                                                <object editable="true" refid="${meiosisView}" />
                                            </td>
                                        </tr>
                                    </table>
                                </td>
                                <td>
                                    <table>
                                        <tr height="310">
                                            <td width="630">
                                                <object refid="${maleChromosome}" />
                                            </td>
                                        </tr>
                                        <tr>
                                            <td>
                                                <object refid="${femaleChromosome}" />
                                            </td>
                                        </tr>
                                    </table>
                                </td>
                            </tr>
                        </table>
                    </bodyText>
                    <documentRefs>
                        <OTSex local_id="meiosisView" width="880" height="620">
                            <fatherOrganism>
                                <object refid="${maleOrganism}" />
                            </fatherOrganism>
                            <motherOrganism>
                                <object refid="${femaleOrganism}" />
                            </motherOrganism>
                        </OTSex>

                        <OTChromosome local_id="maleChromosome" name="maleChromosome" width="630" height="310">
                            <organism>
                                <object refid="${maleOrganism}" />
                            </organism>
                        </OTChromosome>
                        <OTChromosome local_id="femaleChromosome" name="femaleChromosome" width="630" height="310">
                            <organism>
                                <object refid="${femaleOrganism}" />
                            </organism>
                        </OTChromosome>

                        <OTOrganism local_id="femaleOrganism">
                            <name>female</name>
                            <sex>1</sex>
                            <world>
                                <object refid="${dragon_world}" />
                            </world>
                            <alleles>a:b,b:B</alleles>
                        </OTOrganism>
                        <OTOrganism local_id="maleOrganism">
                            <name>male</name>
                            <sex>0</sex>
                            <world>
                                <object refid="${dragon_world}" />
                            </world>
                            <alleles>a:B</alleles>
                        </OTOrganism>

                        <!-- World definition -->
                        <OTWorld speciesPath="org/concord/biologica/worlds/dragon.xml" local_id="dragon_world" />
                    </documentRefs>
                </OTCompoundDoc>

            </root>

        </OTSystem>
    </objects>
</otrunk>
